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Type: New Feature
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Status: Closed
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Priority: Blocker
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Resolution: Fixed
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Affects Version/s: 1.28
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Fix Version/s: 1.31
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Component/s: Basic-Other, NGS
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Labels:
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Environment:
Linux, Mac OS X
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Story Points:5
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Epic Link:
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Sprint:DEV-29-1, DEV-29-2
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Affect Type:Userdefined
For now two executable files should be added: "kraken" and "kraken-build". On the "External Tools" page in the Application Settings they should be in a common group called "Kraken".
Add these tools to the Linux and Mac OS X external tools packages (the tools are not available on Windows).
Description of the group:
Kraken is a taxonomic sequence classifier that assigns taxonomic labels to short DNA reads.
Description of the "kraken" executable:
The "kraken" executable is used to classify a set of sequences. It does this by examining the k-mers within a read and querying a database with those k-mers.
Description of the "kraken-build" executable:
The "kraken-build" executable is used to build a Kraken database.
- blocks
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UGENE-5883 Online installer: Kraken component and license
- Closed