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Type: New Feature
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Status: Closed
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Priority: Blocker
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Resolution: Fixed
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Affects Version/s: 1.28
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Fix Version/s: 1.31
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Component/s: Basic-Other, NGS
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Story Points:2
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Epic Link:
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Sprint:DEV-29-3
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Affect Type:Userdefined
On Windows (32-bit, 64-bit) and 32-bit Linux:
- There shouldn't be "Kraken" group on the "External Tools" page of the UGENE Application Settings.
- There shouldn't be "Build Kraken Database" and "Classify Sequences with Kraken" workflow elements.
On 64-bit Linux and Mac OS X:
In the "Unipro UGENE Installer Setup" wizard of the Universal package add the following items according to the specification:
- On the "Select Components" page add the "Classification with Kraken" group with a check box and two sub-items: "Kraken external tools" and "MiniKraken database".
- On the "License Agreement" page add the "Kraken" item with it's license (specify the license in a comment to this issue).
Installation folder
Unpack the MiniKraken database and the external tools to the "data/ngs_classification/kraken" subfolder of the UGENE installation folder.
- is blocked by
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UGENE-5834 Integrate Kraken as an external tool
- Closed
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UGENE-5835 Add “Classify Sequences with Kraken” workflow element
- Closed
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UGENE-5880 Online installer: general modifications, addition of the metagenome data group
- Closed
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UGENE-5836 Add "Build Kraken Database" workflow element
- Closed