Uploaded image for project: 'UGENE'
  1. UGENE
  2. UGENE-6643

Incorrect "Sequence" in tooltip of an annotation that goes through the start coordinate in a circular sequence

    XMLWordPrintable

    Details

    • Type: Bug
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: master
    • Fix Version/s: 34
    • Component/s: Basic-Nucl
    • Story Points:
      5
    • Sprint:
      DEV-34-5, DEV-34-6, DEV-34-7, DEV-34-8, DEV-34-RELEASE
    • Affect Type:
      Userdefined

      Description

      Scenario:
      Parts of the copied annotation that go through the start coordinate are displayed in reverse order.

      1. Open “_common_data\cmdline\DNA_circular.gb” 
      2. Create a new annotation with name “annot_from_start_coordinate” with location in the GenBank format - "1..10, 740..744" CORRECTION:"740..744,1..10".
      3. Hover the mouse cursor above the created annotation.
        Expected result: a tooltip is shown, it has field "Sequence" with value "CTCAGTTGATTACCT" (i.e. the annotated part of the sequence at the end, the annotated part at the start).
        Actual result: the tooltip is shown, but an incorrect value is shown in the "Sequence" - "TTGATTACCT^CTCAG" (i.e. part at the start, part at the end).
      4. Select “Copy/Paste”->Copy annotation sequence” in the context menu.
      5. Paste the data.
        Expected result: the following string has been pasted from the clipboard: "CTCAGTTGATTACCT".

        Attachments

          Issue Links

            Activity

              People

              Assignee:
              dsukhomlinov Dmitrii Sukhomlinov
              Reporter:
              s.samoilenko Svetlana Samoilenko
              Assigned Tester:
              Svetlana Samoilenko
              Watchers:
              4 Start watching this issue

                Dates

                Created:
                Updated:
                Resolved:

                  Time Tracking

                  Estimated:
                  Original Estimate - Not Specified
                  Not Specified
                  Remaining:
                  Remaining Estimate - Not Specified
                  Not Specified
                  Logged:
                  Time Spent - 22 minutes
                  22m