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Type: Bug
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Status: Closed
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Priority: Major
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Resolution: Duplicate
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Affects Version/s: None
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Fix Version/s: None
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Component/s: Basic-MSA
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Labels:None
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Affect Type:Userdefined
Scenario:
- Open "data/samples/CLUSTAL/COI.aln".
- Click to the "Consensus" label.
- Click to the "Align" button on the toolbar.
- Select "Align with MUSCLE..." item in the popup menu.
- Click "Align" button in the dialog.
Actual state: the are errors in the log or UGENE crashes. The log contains the following text:[DETAILS][11:01] Registering new task: MUSCLE align 'COI.aln' [ERROR][11:01] Can't create a common user modifications step, previous one is not complete! [ERROR][11:01] Trying to recover from error: Can't create a common user modifications step, previous one is not complete! at src\dbi\DbiConnection.cpp:68 [ERROR][11:01] Trying to recover from error: Can't create a common user modifications step, previous one is not complete! at src\util\MultipleSequenceAlignmentImporter.cpp:51 [ERROR][11:01] Trying to recover from error: Can't create a common user modifications step, previous one is not complete! at src\support\SimpleWorkflowTask.cpp:155 [TRACE][11:01] Promoting task {MUSCLE align 'COI.aln'} to 'Prepared' [INFO][11:01] Starting {MUSCLE align 'COI.aln'} task [TRACE][11:01] Promoting task {Workflow wrapper 'MUSCLE align 'COI.aln''} to 'Prepared' [TRACE][11:01] Promoting task {MUSCLE align 'COI.aln'} to 'Running' [TRACE][11:01] Promoting task {Workflow wrapper 'MUSCLE align 'COI.aln''} to 'Running' [TRACE][11:01] AppMemory: 201Mb; Locked memory AppResource: 160/32445; SQLite memory 0Mb, max 0Mb [ERROR][11:01] Trying to recover from error: SimpleMSAWorkflow4GObjectTask::getResult. No task has been created. at src\support\SimpleWorkflowTask.cpp:225 [ERROR][11:01] Trying to recover from error: The alignment alphabet is NULL! at src\util\MsaDbiUtils.cpp:778 [TRACE][11:01] Promoting task {Workflow wrapper 'MUSCLE align 'COI.aln''} to 'Finished' [TRACE][11:01] Promoting task {MUSCLE align 'COI.aln'} to 'Finished'
- duplicates
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UGENE-6751 Crash after clicking on the "Consensus" label in the AE and aligning with MUSCLE
- Closed