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  1. UGENE
  2. UGENE-7406

Crash when execute workflow Read annotation->Write annotation with different formats

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    Details

    • Type: Bug
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: 39, 40, 41, 42, 43, 44
    • Fix Version/s: 45
    • Component/s: None
    • Labels:
    • Sprint:
      DEV-42-1, DEV-42-2, DEV-42-3, DEV-42-4, DEV-42-5, DEV-42-RELEASE, DEV-43-1, DEV-43-2, DEV-43-3, DEV-43-4, DEV-43-5, DEV-43-RELEASE, DEV-44-1, DEV-44-2, DEV-44-3, DEV-44-4, DEV-44-5, DEV-44-RELEASE, DEV-45-1, DEV-45-2, DEV-45-3, DEV-45-4
    • Affect Type:
      Userdefined

      Description

      Reproducible on 39.0 and 40.0 versions
      Scenario:
      1. In WD create schema: Read annotation -> Write annotation
      2. Select Read annotation element and add attached annotation file
      3. Select Write annotation element
      4. Select Document format = UGENE database
      5. Run workflow
      Crash

      12:33:44.872] [Core Services] Saving document C:/Users/ccv/workflow_output/2021.09.06_12-33/ABCGTD000000000.ugenedb
      
      [12:33:44.872] [Core Services] File 'C:/Users/ccv/workflow_output/2021.09.06_12-33/ABCGTD000000000.ugenedb' doesn't exist, going to write it directly
      [12:33:44.879] [Input/Output] SQLite: initialized: C:/Users/ccv/workflow_output/2021.09.06_12-33/ABCGTD000000000.ugenedb
      
      [12:33:44.880] [Core Services] Trying to recover from error: Invalid annotation location! at C:\BuildAgent\work\release\ugene\src\corelibs\U2Core\src\util\U2FeatureUtils.cpp:86
      
      Task tree:
      Execute workflow	(Running) 49
      -Workflow run (Running) 49
      --Save document	(Running) -1
      

      see crash report 24283

        Attachments

        1. ABCGTD000000000.gb
          5 kB
          Svetlana Samoilenko

          Activity

            People

            Assignee:
            yalgaer Yuliya Algaer
            Reporter:
            s.samoilenko Svetlana Samoilenko
            Assigned Tester:
            Svetlana Samoilenko
            Watchers:
            3 Start watching this issue

              Dates

              Created:
              Updated:
              Resolved: