Uploaded image for project: 'UGENE'
  1. UGENE
  2. UGENE-8039

Transform any sequence pair to primer pairs

    XMLWordPrintable

    Details

    • Type: New Feature
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: None
    • Fix Version/s: 50
    • Component/s: None
    • Labels:
      None
    • Epic Link:
    • Sprint:
      DEV-50-RELEASE
    • Affect Type:
      Userdefined

      Description

      Primer-BLAST, included in UGENE-7921, could BLAST only primers, which are produced by Primer3. Sometimes, user could have primers, which he's got from some external sources:

      In this case, primer pair is not defined as a fit primer pair to be BLASTed. 

      The best solution here is to select primers you want to blast, click some button and make copyes of them in a "top_primer" annotations table (default annotation table for primer pairs).

       

      Scenario:

      1. Open _common_data\primer3\custom_primers.gb.
      2. Select "primer1" and "primer2" annotations.
      3. Click right mouse button -> Edit -> Transform into a primer pair.
        Expected: new primer pair has appeared.

        Attachments

          Issue Links

            Activity

              People

              Assignee:
              dsukhomlinov Dmitrii Sukhomlinov
              Reporter:
              dsukhomlinov Dmitrii Sukhomlinov
              Assigned Tester:
              Svetlana Samoilenko
              Watchers:
              2 Start watching this issue

                Dates

                Created:
                Updated:
                Resolved: