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  1. UGENE
  2. UGENE-6294

Add MetaPhlAn2 to sample workflows

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    • Story Points:
      2
    • Epic Link:
    • Sprint:
      DEV-32-4
    • Affect Type:
      Userdefined

      Description

      Add "Classify Sequences with MetaPhlAn2" element to classification sample workflows: parallel and general. More specifically, modify the following UWL files:

      • NGS⁩/⁨from_tools_menu_only⁩/ngs_classification.uwl
      • NGS/ngs_classification_parallel.uwl
      • NGS⁩/⁨ngs_classification/⁨ngs_classification_parallel/⁩ngs_classification_parallel_single.uwl
      • NGS⁩/⁨ngs_classification/⁨ngs_classification_parallel/ngs_classification_parallel_paired.uwl

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          is blocked by

          Improvement - An improvement or enhancement to an existing feature or task. UGENE-6290 Add "Analysis type" and other parameters to MetaPhlAn2

          • Blocker - Blocks development and/or testing work, production could not run.
          • Closed
          relates to

          New Feature - A new feature of the product, which has yet to be developed. UGENE-6254 Add "Classify Sequences with MetaPhlAn2" workflow element

          • Blocker - Blocks development and/or testing work, production could not run.
          • Closed

          Bug - A problem which impairs or prevents the functions of the product. UGENE-6312 Crash on ensembling classification data of big size

          • Blocker - Blocks development and/or testing work, production could not run.
          • Closed

          Bug - A problem which impairs or prevents the functions of the product. UGENE-6311 Selection of "Input file format" in the MetaPhlAn2 workflow element

          • Critical - Crashes, loss of data, severe memory leak.
          • Closed

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              Assignee:
              oigl Olga Golosova
              Reporter:
              oigl Olga Golosova
              Assigned Tester:
              Svetlana Samoilenko
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                Dates

                Created:
                Updated:
                Resolved: