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- UGENE-4321
Test issues 3982, 3862, 4035 - UGENE-4315
Test issues 3233, 4094, 4115, 4166 - UGENE-4274
Disable algorithms for very big sequences on a 32-bit OS - UGENE-4181
FreeBSD build problems - UGENE-4174
Annotation tracks in the Assembly Browser - UGENE-4129
Input datasets in raw NGS data processing wizards - UGENE-4124
UGENE genome aligner can't create a result file twice - UGENE-4066
Workflow sample: align sequences & primers - UGENE-4044
Correct NGS workflows layout and description - UGENE-4021
Cuffmerge & Cuffdiff output on dashboard - UGENE-3972
BWA-MEM: default number of threads - UGENE-3752
Open recent file from Wecome Page - UGENE-3617
"Find pattern widget" should highlight a pattern widget in case of an incorrect pattern - UGENE-3582
Create remote BLAST sample - UGENE-3235
Relaxed PHYLIP Format - UGENE-2860
Put all tools related to primers to a separate bar (on the Options Panel) - UGENE-2851
Database of plasmids - UGENE-2848
Circular view improvements - UGENE-2839
Sequence View easy configuration - UGENE-2636
Primer3: allow to save options as sets - UGENE-2454
Warn a user when an assembly file is removed from file system - UGENE-2409
Create "FIlter annotation by qualifer" worker - UGENE-2340
Output files in WD, different datasets - UGENE-2088
Transfer data from Vector NTI - UGENE-1935
Use database to handle annotations in UGENE - UGENE-1873
Find out how statistics fields are created and added to options panel - UGENE-1789
Think of a simple way to export sequences to alignment and vice versa - UGENE-1779
Cistrome pipeline: RScript validation and installation - UGENE-1776
Error message on the WD dashboard - UGENE-1763
Improve dashboards - UGENE-1477
VCF Format doesn't support comments and headers - UGENE-1139
Review: GObject::clone() - UGENE-980
Common widget for saving annotations on the Options Panel - UGENE-975
Select region on the Options Panel in the Sequence View - UGENE-973
Move statistics to the Options Panel - UGENE-959
Working directory in the Workflow Designer - UGENE-949
Primer designer: allow to choose exons to span - UGENE-922
Option to export consensus for current contig - UGENE-901
Add GUI for samtools features - UGENE-830
[TEST FAIL] A result file is created when CAP3 fails - UGENE-777
Start point for the Sequence View (for circular sequences) - UGENE-693
Support Maximum Likelihood algorithm for building phytrees - UGENE-512
Problem with OpenCL on MacOS - UGENE-509
Reimplement Bowtie worker - UGENE-481
Add welcome screen to UGENE - UGENE-451
Support BED file format - UGENE-450
Support import of ACE to ugenedb - UGENE-447
Support multiple short read tracks in AB - UGENE-444
Allow to customize AB interface - UGENE-424
Clean up workflow format
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